Package: Biopeak
Type: Package
Title: Identification of Impulse-Like Gene Expression Changes in Short
        Genomic Series Data
Version: 1.0
Author: David Lauenstein
Maintainer: David Lauenstein <david.lauenstein@gmail.com>
Description: Enables the user to systematically identify and visualize impulse-like gene expression changes within short genomic series experiments. In order to detect such activation peaks, the gene expression is treated as a signal that propagates along an experimental axis (time, temperature or other series conditions). Peaks are selected by exhaustive identification of local maximums and subsequent filtering based on a range of controllable parameters. Moreover, the 'Biopeak' package provides a series of data exploration tools including: expression profile plots, correlation heat maps and clustering functionalities.
License: GPL (>= 2)
Depends: R (>= 2.10)
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Imports: cluster, dbscan, factoextra, gplots, RColorBrewer, stats,
        graphics
LazyData: True
RoxygenNote: 6.1.1
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2019-08-09 09:40:11 UTC; David
Repository: CRAN
Date/Publication: 2019-08-21 09:40:06 UTC
Built: R 4.0.2; ; 2020-07-17 15:19:42 UTC; unix
