bulge_loop              Get bulge loops in a RNA secondary structure
compare                 compare
ct2dot                  ct2dot
hairpin_loop            hairpin_loop
internal_loop           Get Internal Loop
multi_branch_loop       multi_branch_loop
plot_bulge              plot_bulge
plot_hairpin            plot_hairpin
plot_internal_loop      plot_internal_loop
plot_multi_branch_loop
                        plot_multi_branch_loop
plot_stem               plot_stem
stem                    stem
