ConvertPhangornReconstructions
                        Convert phangorn reconstruction to a vector
ancRECON                Ancestral state reconstruction
corDISC                 Correlated evolution binary traits
corHMM                  Hidden Rates Model
getFullMat              Combines several rate class index matrices
getStateMat4Dat         Produce an index matrix and legend from a
                        dataset
makeSimmap              Simulate a character history
plotMKmodel             Plot a Markov model
plotRECON               Plot ancestral state reconstructions
primates                Example datasets
rayDISC                 Evolution of categorical traits
