# Generated by roxygen2: do not edit by hand

export(DoProjectPlots)
export(NegLogInt_Fn)
export(PinerPlot)
export(SSMethod.Cond.TA1.8)
export(SSMethod.TA1.8)
export(SS_ForeCatch)
export(SS_RunJitter)
export(SS_changepars)
export(SS_doRetro)
export(SS_fitbiasramp)
export(SS_html)
export(SS_makeHTMLdiagnostictable)
export(SS_makedatlist)
export(SS_output)
export(SS_parlines)
export(SS_plots)
export(SS_profile)
export(SS_read_summary)
export(SS_readctl)
export(SS_readctl_3.24)
export(SS_readctl_3.30)
export(SS_readdat)
export(SS_readdat_2.00)
export(SS_readdat_3.00)
export(SS_readdat_3.24)
export(SS_readdat_3.30)
export(SS_readforecast)
export(SS_readstarter)
export(SS_readwtatage)
export(SS_recdevs)
export(SS_splitdat)
export(SS_tune_comps)
export(SS_varadjust)
export(SS_writectl)
export(SS_writectl_3.24)
export(SS_writectl_3.30)
export(SS_writedat)
export(SS_writedat_3.24)
export(SS_writedat_3.30)
export(SS_writeforecast)
export(SS_writestarter)
export(SS_writewtatage)
export(SSbiologytables)
export(SSbootstrap)
export(SSexecutivesummary)
export(SSgetMCMC)
export(SSgetoutput)
export(SSmakeMmatrix)
export(SSmohnsrho)
export(SSplotAgeMatrix)
export(SSplotBiology)
export(SSplotCatch)
export(SSplotCohortCatch)
export(SSplotComparisons)
export(SSplotComps)
export(SSplotData)
export(SSplotDiscard)
export(SSplotIndices)
export(SSplotMCMC_ExtraSelex)
export(SSplotMnwt)
export(SSplotMovementMap)
export(SSplotMovementRates)
export(SSplotNumbers)
export(SSplotPars)
export(SSplotProfile)
export(SSplotRecdevs)
export(SSplotRecdist)
export(SSplotRetroRecruits)
export(SSplotSPR)
export(SSplotSelex)
export(SSplotSexRatio)
export(SSplotSpawnrecruit)
export(SSplotSummaryF)
export(SSplotTags)
export(SSplotTimeseries)
export(SSplotYield)
export(SSsummarize)
export(SStableComparisons)
export(SStimeseries)
export(SSunavailableSpawningOutput)
export(TSCplot)
export(getADMBHessian)
export(make_multifig)
export(make_multifig_sexratio)
export(mcmc.nuisance)
export(mcmc.out)
export(mountains)
export(read.admbFit)
export(rich.colors.short)
export(selShapes)
export(stackpoly)
import(coda)
import(kableExtra)
importFrom(corpcor,pseudoinverse)
importFrom(gdata,write.fwf)
importFrom(gplots,hist2d)
importFrom(grDevices,adjustcolor)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.new)
importFrom(grDevices,dev.off)
importFrom(grDevices,graphics.off)
importFrom(grDevices,gray)
importFrom(grDevices,grey)
importFrom(grDevices,pdf)
importFrom(grDevices,png)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(grDevices,topo.colors)
importFrom(graphics,abline)
importFrom(graphics,arrows)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,box)
importFrom(graphics,contour)
importFrom(graphics,curve)
importFrom(graphics,grid)
importFrom(graphics,hist)
importFrom(graphics,image)
importFrom(graphics,layout)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,matplot)
importFrom(graphics,mtext)
importFrom(graphics,pairs)
importFrom(graphics,par)
importFrom(graphics,persp)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(graphics,rect)
importFrom(graphics,segments)
importFrom(graphics,symbols)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(gtools,running)
importFrom(pso,psoptim)
importFrom(stats,acf)
importFrom(stats,aggregate)
importFrom(stats,density)
importFrom(stats,dnorm)
importFrom(stats,loess)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,nlminb)
importFrom(stats,optim)
importFrom(stats,pnorm)
importFrom(stats,qbeta)
importFrom(stats,qchisq)
importFrom(stats,qlnorm)
importFrom(stats,qnorm)
importFrom(stats,qt)
importFrom(stats,quantile)
importFrom(stats,reshape)
importFrom(stats,rnorm)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(stats,window)
importFrom(utils,browseURL)
importFrom(utils,flush.console)
importFrom(utils,head)
importFrom(utils,packageDescription)
importFrom(utils,read.csv)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,type.convert)
importFrom(utils,write.csv)
importFrom(utils,write.table)
