Package: sybilcycleFreeFlux
Type: Package
Title: Cycle-Free Flux Balance Analysis (CycleFreeFlux)
Version: 2.0.2
Date: 2021-01-12
Maintainer: Abdelmoneim Amer Desouki <abdelmoneim.amer@uni-duesseldorf.de>
Author: Abdelmoneim Amer Desouki [aut, cre]
Depends: R (>= 3.0.3), sybil, Matrix, MASS
Imports: methods
Suggests: cplexAPI (>= 1.2.6),glpkAPI (>= 1.2.1)
Description: Implement cycle-Free flux balance analysis (CycleFreeFlux), cycle-free flux variability, and Random Sampling of solution space.
      Desouki, A. A., Jarre, F., Gelius-Dietrich, G., & Lercher, M. J. (2015). CycleFreeFlux: efficient removal of thermodynamically
      infeasible loops from flux distributions. Bioinformatics, 31(13), 2159-2165. <doi:10.1093/bioinformatics/btv096>. 
      Flux balance analysis is a technique to find fluxes in metabolic models at steady state. 
      It is described in Orth, J.D., Thiele, I. and Palsson, B.O. What is flux balance analysis? Nat. Biotech. 28, 245-248 (2010).
LazyLoad: yes
License: GPL-3
NeedsCompilation: no
Packaged: 2021-01-12 20:24:46 UTC; abdel
Repository: CRAN
Date/Publication: 2021-01-13 12:40:02 UTC
Built: R 4.0.2; ; 2021-01-14 11:48:07 UTC; unix
