auto.axis	auto.axis
CNA	CNA
color.gradient	colour.gradient
colour.gradient	colour.gradient
covariates.grob	covariates.grob
create.barplot	create.barplot
create.boxplot	create.boxplot
create.colorkey	create.colourkey
create.colourkey	create.colourkey
create.dendrogram	create.dendrogram
create.densityplot	create.densityplot
create.dotmap	create.dotmap
create.gif	create.gif
create.heatmap	create.heatmap
create.hexbinplot	create.hexbinplot
create.histogram	create.histogram
create.lollipopplot	create.lollipopplot
create.manhattanplot	create.manhattanplot
create.multipanelplot	create.multipanelplot
create.multiplot	create.multiplot
create.polygonplot	create.polygonplot
create.qqplot.comparison	create.qqplot.comparison
create.qqplot.fit	create.qqplot.fit
create.qqplot.fit.confidence.interval	create.qqplot.fit.confidence.interval
create.scatterplot	create.scatterplot
create.segplot	create.segplot
create.stripplot	create.stripplot
create.violinplot	create.violinplot
critical.value.ks.test	critical.value.ks.test
default.colors	default.colours
default.colours	default.colours
display.colors	display.colours
display.colours	display.colours
display.statistical.result	display.statistical.result
dist	dist
force.color.scheme	force.colour.scheme
force.colour.scheme	force.colour.scheme
generate.at.final	generate.at.final
get.corr.key	get.corr.key
get.correlation.p.and.corr	get.correlation.p.and.corr
get.defaults	get.defaults
get.line.breaks	get.line.breaks
legend.grob	legend.grob
microarray	microarray
panel.BL.bwplot	panel.BL.bwplot
patient	patient
pcawg.colors	pcawg.colours
pcawg.colours	pcawg.colours
scientific.notation	scientific.notation
show.available.palettes	show.available.palettes
SNV	SNV
thousands.split	thousands.split
write.metadata	write.metadata
write.plot	write.plot
