bin                     Bin values into increasingly wider bins
cellhealth              Cell Painting dataset of CRISPR perturbations.
cellhealthmetrics       Quality metrics for Cell Painting dataset of
                        CRISPR perturbations.
drop_annotation         Drop row annotations.
get_annotation          Get row annotations.
get_p_value             Compute p-value against null distribution
matric                  matric: Metrics for Similarity Matrices
null_distribution       Compute null distribution for a set of metrics
null_distribution_helper
                        Compute null distribution of metrics
preprocess_data         Preprocess data. 'preprocess_data' preprocesses
                        data.
sim_annotate            Annotate a melted similarity matrix.
sim_calculate           Calculate a melted similarity matrix.
sim_calculate_ij        Calculate similarities given pairs of rows
sim_collate             Collate several subsets of a melted similarity
                        matrix, required for computing metrics.
sim_filter_all_same     Filter a melted similarity matrix to keep pairs
                        with the same values in specific columns.
sim_filter_all_same_keep_some
                        Filter a melted similarity matrix to keep pairs
                        with the same values in specific columns, and
                        keep only some of these pairs.
sim_filter_keep_or_drop_some
                        Filter a melted similarity matrix to remove or
                        keep specified rows.
sim_filter_some_different_drop_some
                        Filter a melted similarity matrix to keep pairs
                        with the same values in specific columns, and
                        other constraints.
sim_metrics             Compute metrics.
sim_metrics_helper      Helper function to compute metrics.
sim_metrics_signif      Report p-values for metrics
sim_new                 Constructor for 'matric_sim' S3 class.
sim_plot                Plot a melted similarity matrix.
sim_read                Read similarity matrix.
sim_restore             Restorer for 'matric_sim' S3 class.
sim_validate            Validator for 'matric_sim' S3 class.
sim_wider               Widen a symmetric melted similarity matrix.
sim_write               Write similarity matrix.
sparse_pairwise         Compute similarity between pairs of rows of a
                        matrix
sparse_similarity       Compute similarity between pairs of rows of a
                        matrix
tcrossprod_ij           Compute cross product between two sets of rows
                        of a matrix.
