536aca50c79d9f24122bd7a58b9bef5d *DESCRIPTION
4d1144c2f6fc319be64dc8e75139cfab *NAMESPACE
739db649e4a658b5928409b94d284c22 *NEWS
096bcebe1d739e701ea8d3a6d08ed116 *R/PeakErrorSamples.R
b87e928ce4b813e20b6a671fcd5e1215 *R/PeakSegJoint.R
91ca416753d0caf18ad037e8d0368b9c *R/PeakSegJointError.R
e6804a90f52bdb99dd910beef93dbd37 *R/PoissonLoss.R
3a487c5dde8ed35d4a58f92de67d2e4f *R/binSum.R
9a1ab188646213e1cdc0ba01686a68a9 *R/clusterPeaks.R
9e1ff6f5da6c04d58f4e61d67bdbf123 *R/features.R
aa3014f6ec33f7a0333bb1cb8c770417 *R/multiClusterPeaks.R
b002f1979e35d061b57cc2cc0b14d53e *data/H3K27ac.TDH.MMM4.RData
f2b427b40549be87edaa3858fc1ce917 *data/H3K36me3.AM.immune.chunk21.RData
4f6cc61618f17908081449150f6a67f9 *data/H3K36me3.TDH.other.chunk1.RData
e4d3e43fdd280f1793ba84894e8ca6f9 *data/H3K4me3.PGP.immune.chunk2.RData
2ab0805c0fd38660cc70f862d97a412f *data/H3K4me3.TDH.other.chunk8.RData
0a72957dee8d17d1210904fa9d6e60fd *data/chr7.peaks.RData
6795f191ae1cdee8f8467b000e34282b *data/demo.profiles.RData
d51f5038df997cc5c55e5bf33d6e1f9a *data/overflow.list.RData
657da13badcdfb8762752aa0dd7c8a36 *data/peak.at.profile.end.RData
ee3cff368e7e71ff5d8a2d56f56b93e6 *data/peak1.infeasible.RData
102997a2e2ba28d0ac71bc9fdd62f72b *man/ConvertModelList.Rd
883f2edd1708f0cf4ea873d112b8a014 *man/GeomTallRect.Rd
2fad93d8d2b2671cbde6f20120dc867f *man/H3K27ac.TDH.MMM4.Rd
ead8334f8e5271ae4d77e9429cdf082c *man/H3K36me3.AM.immune.chunk21.Rd
8d02b661630363b153cffa9b0578bcb2 *man/H3K36me3.TDH.other.chunk1.Rd
6182263f56af7288db23c1487bd3a6ea *man/H3K4me3.PGP.immune.chunk2.Rd
511b6025e52cafb039fe847d19c95810 *man/H3K4me3.TDH.other.chunk8.Rd
28295ed5a62129b3b8ea7c22e3df2d30 *man/PeakErrorSamples.Rd
70900491217917a178759eecca2ee4f3 *man/PeakSegJointError.Rd
9c63e12e4b23bb93c5f381260019433c *man/PeakSegJointFaster.Rd
84322fd69bd8a424d343a844b1b8e3f4 *man/PeakSegJointFasterOne.Rd
cdb727f828c828239aa691271200202c *man/PeakSegJointHeuristic.Rd
c2ce685377cfc1f932f2a75859f66b04 *man/PeakSegJointHeuristicStep1.Rd
daea03bc2c3ce7812953bead691239a2 *man/PeakSegJointHeuristicStep2.Rd
441b95fc5383a0b9241147d5ccf9adf6 *man/PeakSegJointSeveral.Rd
595f4a1d545202423aefa771a9b0d345 *man/PoissonLoss.Rd
462b334f1a09c5725fed3ee943cf21ac *man/ProfileList.Rd
a0ef6764429d2837fdf7303376f10ca4 *man/binSum.Rd
28ce631d2f11e97c0e5ebf38922158da *man/chr7.peaks.Rd
ab9ae70f71e4d4e0109e19ede144da0b *man/clusterPeaks.Rd
f1fecd943fa4b369eb0c054a5909f4a9 *man/demo.profiles.Rd
0350c47baead97e3ee77f440ac204c5a *man/featureMatrixJoint.Rd
45d6570327ff86eeb93c6f32fa03f23b *man/multiClusterPeaks.Rd
974d8570f671872dbbeb73e3a663279a *man/overflow.list.Rd
d248470d2dc922b01dce3dca80882ccb *man/peak.at.profile.end.Rd
e945ec0c2eff356a3fe6a22fcc071a32 *man/peak1.infeasible.Rd
06ccdf933a2bb09a9e4f3cef78d8cb49 *src/OptimalPoissonLoss.c
b57436e1e18fd1f5c83327e153537b8b *src/OptimalPoissonLoss.h
0cd59550986efa51e63bf31651406067 *src/PeakSegJoint.c
f7e2f4d02e0fb6e8a2a42bcff1cde64b *src/PeakSegJoint.h
03607f2e47bf9544c226655a7a64731a *src/PeakSegJointFaster.c
60c4f66025b8dadfa36f042290c6e5eb *src/PeakSegJointFaster.h
89545d4850adad2bb488bf43a7119471 *src/PeakSegJoint_interface.c
ab42792671d3232bf23ed2bc0e3bff1a *src/binSum.c
3eb7c8a8c1d43ccee637f21a3f9fa545 *src/binSum.h
afdf97a9f8ed5441c7b387eab12854d2 *src/clusterPeaks.c
8def9336fd0a6c027be2ee002e297daf *src/clusterPeaks.h
ba76dd373fa40fcf93eb7f8a6ccdb5e0 *src/multiClusterPeaks.c
4eed6b2467659a8218c5331a48f832a6 *src/multiClusterPeaks.h
26e80c532d10bff764e6ed8367e96161 *src/profile.c
f2e1fadfacd924f207b8001c94b72fef *src/profile.h
014dce96a0b49e245759b94ac2d0e052 *tests/testthat.R
d01d9a2749518a4369b053d321173557 *tests/testthat/test-CRAN-binSum.R
cef9a269a64c56954f7937902d1b1929 *tests/testthat/test-CRAN-converted.R
13fb88d4cdc1ad123c1c46cff93be014 *tests/testthat/test-CRAN-features.R
646847df6b77d9c2f4ebf0481272abd7 *tests/testthat/test-CRAN-likelihood.R
cd4954c88670a7c665750af45902067c *tests/testthat/test-CRAN-trivial.R
eecc1b7f107ea9d3c6830874098fca20 *tests/testthat/test-CRAN.R
