Last updated on 2025-09-10 08:49:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.26 | 245.61 | 259.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.40 | 234.68 | 245.08 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.79 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 233.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.631, system: 0.067, elapsed: 2.618 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.824, system: 0.122, elapsed: 10.022 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.718, system: 0.222, elapsed: 4.491 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.174 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.038, system: 0.450, elapsed: 18.128 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.055, elapsed: 1.886 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.262, system: 0.246, elapsed: 13.023 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.015, elapsed: 0.219 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.963, system: 0.249, elapsed: 8.304 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.464 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.633, system: 0.596, elapsed: 24.670 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.048, elapsed: 4.439 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.225, system: 0.168, elapsed: 21.906 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.356 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.905, system: 0.240, elapsed: 6.770 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.262 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.184, system: 0.230, elapsed: 1.263 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.888, system: 0.731, elapsed: 36.516 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.066, elapsed: 2.832 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.193, system: 0.192, elapsed: 13.164 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.019, elapsed: 0.376 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.023, system: 0.326, elapsed: 6.827 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.011, elapsed: 0.271 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.442, system: 0.681, elapsed: 14.867 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.349, system: 1.333, elapsed: 39.364 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.063, elapsed: 2.164 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.137, system: 0.253, elapsed: 13.773 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.017, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.708, system: 0.249, elapsed: 7.500 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.007, elapsed: 0.342 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.321, system: 0.615, elapsed: 25.059 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.636, system: 0.065, elapsed: 3.112 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.129, system: 0.232, elapsed: 16.048 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.017, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.687, system: 0.223, elapsed: 5.183 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.008, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.357, system: 0.580, elapsed: 25.824 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.733, system: 0.087, elapsed: 2.765 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.130, system: 0.284, elapsed: 11.781 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.015, elapsed: 0.237 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.587, system: 0.252, elapsed: 5.296 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.014, elapsed: 0.337 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.059, system: 0.232, elapsed: 1.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.484, system: 0.924, elapsed: 22.750 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.475, system: 0.031, elapsed: 2.210 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.851, system: 0.115, elapsed: 13.960 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.363 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.543, system: 0.165, elapsed: 6.216 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.256 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.957, system: 0.534, elapsed: 16.930 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.801, system: 0.892, elapsed: 41.095 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64